miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|218825616|gb|FC886794.1|FC886794 TTGTCAATGTGTCCCTAAATTCAATGTAAATGATGTTTTCTAGAATATGAAAATCAACCTGACCTTTAGTTCAGATCCTC
ACTCGGTTTTGTAGTATATGAATTTTCTATTTCTCTTGCAATTTTTGTTATGGATCTTTTGTGTCTGAATATAGTCATAA
ATAGTGATGATTTTGTATCACCAGAGTATTAAATTGTTACAAGTTCTCAATTAATGTATACCATGTGTTTGAATGATGGT
GAGACCTAAACTGGTGCAAATCATAGTCACATGATATAAATTTTGACCTTGTACTATGTAGCGTTATAACGTTCAATCAT
GGCGACGGAGGTGATGGATCTTCCTCGAAGAACTTGACATGTTTAAACGTTGCATTAAAGTTCTTTAAGATTTTCTTGAT
TTACATAAGACAAAGGATTTTAGTTAACTAGTTTTATGCTTTTAACTTTGGAGCAGTAATTACTAGGAAGTCTTTTCTGC
TGTTTTGTTGATAAACATTTTCTTGCACTTGGTTTTTACTACGTTCTTTTGAGTTTTGAGAAAGAGAAAAAATTTAGTGA
GTTGTTTATTCTGAGTGTGAAGTTAGATAAAGTTAATTACTTTGATTGATTAACTTCACAGAATGTTGCCTATTAATTTA
GACAGCCAATAACAATCAATGATTTATATTTTTGCTTGGTGCAGAAATAAGGGAATAAGTTTTGTTGCCATTGATCAGAA
CAGGCCACTGTCAGATCAAGGGCCTTTTGATGTTGTCTTGCACAAGTTGTCAGGAATGGAGTGGTGCGAGATCATTGAGG
ATTACAGGCAGAAACATCCAGAAGTTACCATCCTTGATCCACCAGATGCAATTAAACATCTACACAATCGACAGTCCATG
CTTCANGATGTGGCAGATCTTAACTTGTCTG




Most similar to sp|O81893|ITPK3_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|O81893|ITPK3_ARATH Inositol-tetrakisphosphate 1-kinase 3
           OS=Arabidopsis thaliana GN=ITPK3 PE=2 SV=3
          Length = 391

 Score =  119 bits (298), Expect = 3e-26
 Identities = 56/76 (73%), Positives = 65/76 (85%)
 Frame = +2

Query: 683 RNKGISFVAIDQNRPLSDQGPFDVVLHKLSGMEWCEIIEDYRQKHPEVTILDPPDAIKHL 862
           R KGI FVAID NRPLS+QGPFDVVLHKL G EW E+IEDY+QKHPEVT+LDPP +I+ +
Sbjct: 105 RRKGIFFVAIDLNRPLSEQGPFDVVLHKLLGKEWEEVIEDYQQKHPEVTVLDPPGSIQRI 164

Query: 863 HNRQSMLXDVADLNLS 910
           +NRQSML  +ADL LS
Sbjct: 165 YNRQSMLQGMADLKLS 180